J3_7M4U_004
3D structure
- PDB id
- 7M4U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-Eravacycline complex: 30S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.71 Å
Loop
- Sequence
- CUAG*CGCAG*CGAUAAG
- Length
- 16 nucleotides
- Bulged bases
- 7M4U|1|a|U|868, 7M4U|1|a|A|870
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7M4U_004 not in the Motif Atlas
- Homologous match to J3_5J7L_004
- Geometric discrepancy: 0.1487
- The information below is about J3_5J7L_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_85054.4
- Basepair signature
- cWW-tWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 3
Unit IDs
7M4U|1|a|C|823
7M4U|1|a|U|824
7M4U|1|a|A|825
7M4U|1|a|G|826
*
7M4U|1|a|C|854
7M4U|1|a|G|855
7M4U|1|a|C|856
7M4U|1|a|A|857
7M4U|1|a|G|858
*
7M4U|1|a|C|865
7M4U|1|a|G|866
7M4U|1|a|A|867
7M4U|1|a|U|868
7M4U|1|a|A|869
7M4U|1|a|A|870
7M4U|1|a|G|871
Current chains
- Chain a
- 16s Ribosomal RNA
Nearby chains
- Chain b
- 30S ribosomal protein S2
- Chain h
- 30S ribosomal protein S8
- Chain u
- 30S ribosomal protein S21
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