J3_7M4X_035

3D structure

PDB id

7M4X (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

7M4X|1|a|C|1211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7M4X_035 not in the Motif Atlas

Homologous match to J3_4LFB_016

Geometric discrepancy: 0.1178

The information below is about J3_4LFB_016

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_28881.1

Basepair signature

cWW-tWH-F-F-cWW-cWW-F-F-F-cWS-cWW

Number of instances in this motif group

2

Unit IDs

7M4X|1|a|C|987
7M4X|1|a|U|988
7M4X|1|a|U|989
7M4X|1|a|G|990
7M4X|1|a|A|991
7M4X|1|a|C|992
7M4X|1|a|A|993
7M4X|1|a|U|994
*
7M4X|1|a|A|1041
7M4X|1|a|C|1042
7M4X|1|a|A|1043
7M4X|1|a|G|1044
*
7M4X|1|a|C|1207
7M4X|1|a|U|1208
7M4X|1|a|U|1209
7M4X|1|a|A|1210
7M4X|1|a|C|1211
7M4X|1|a|G|1212

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14