J3_7M4Z_035
3D structure
- PDB id
- 7M4Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-Eravacycline complex: 70S with hpf
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.92 Å
Loop
- Sequence
- CAAG*CUAGUAA*UGAAUACG
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7M4Z_035 not in the Motif Atlas
- Homologous match to J3_5J7L_052
- Geometric discrepancy: 0.0934
- The information below is about J3_5J7L_052
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_25303.4
- Basepair signature
- cWW-F-F-cSS-F-cWW-tWW-F-tWH-F-tHS-cSH-cWW
- Number of instances in this motif group
- 4
Unit IDs
7M4Z|1|a|C|933
7M4Z|1|a|A|934
7M4Z|1|a|A|935
7M4Z|1|a|G|936
*
7M4Z|1|a|C|1341
7M4Z|1|a|U|1342
7M4Z|1|a|A|1343
7M4Z|1|a|G|1344
7M4Z|1|a|U|1345
7M4Z|1|a|A|1346
7M4Z|1|a|A|1347
*
7M4Z|1|a|U|1369
7M4Z|1|a|G|1370
7M4Z|1|a|A|1371
7M4Z|1|a|A|1372
7M4Z|1|a|U|1373
7M4Z|1|a|A|1374
7M4Z|1|a|C|1375
7M4Z|1|a|G|1376
Current chains
- Chain a
- 16s Ribosomal RNA
Nearby chains
- Chain g
- 30S ribosomal protein S7
- Chain i
- 30S ribosomal protein S9
- Chain v
- Ribosomal subunit interface protein
Coloring options: