3D structure

PDB id
7MSC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mtb 70SIC in complex with MtbEttA at Pre_R0 state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.97 Å

Loop

Sequence
CUAG*CGUAG*CAUUAAG
Length
16 nucleotides
Bulged bases
7MSC|1|a|U|864
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7MSC_020 not in the Motif Atlas
Homologous match to J3_5J7L_004
Geometric discrepancy: 0.1408
The information below is about J3_5J7L_004
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_85054.4
Basepair signature
cWW-tWW-tHS-F-cWW-tHS-cWW-F
Number of instances in this motif group
3

Unit IDs

7MSC|1|a|C|817
7MSC|1|a|U|818
7MSC|1|a|A|819
7MSC|1|a|G|820
*
7MSC|1|a|C|850
7MSC|1|a|G|851
7MSC|1|a|U|852
7MSC|1|a|A|853
7MSC|1|a|G|854
*
7MSC|1|a|C|861
7MSC|1|a|A|862
7MSC|1|a|U|863
7MSC|1|a|U|864
7MSC|1|a|A|865
7MSC|1|a|A|866
7MSC|1|a|G|867

Current chains

Chain a
16S rRNA

Nearby chains

Chain h
30S ribosomal protein S8

Coloring options:


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