J3_7MSH_006

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CGAAAG*CAG*CAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7MSH_006 not in the Motif Atlas

Homologous match to J3_5J7L_041

Geometric discrepancy: 0.1536

The information below is about J3_5J7L_041

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.6

Basepair signature

cWW-tSH-F-F-F-cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

7MSH|1|A|C|1429
7MSH|1|A|G|1430
7MSH|1|A|A|1431
7MSH|1|A|A|1432
7MSH|1|A|A|1433
7MSH|1|A|G|1434
*
7MSH|1|A|C|1860
7MSH|1|A|A|1861
7MSH|1|A|G|1862
*
7MSH|1|A|C|1874
7MSH|1|A|A|1875
7MSH|1|A|A|1876
7MSH|1|A|G|1877

Current chains

Chain A

23S rRNA

Nearby chains