J3_7MSH_007

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CAAG*CCCAAAC*GUG

Length

14 nucleotides

Bulged bases

7MSH|1|A|A|1844

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7MSH_007 not in the Motif Atlas

Homologous match to J3_7A0S_007

Geometric discrepancy: 0.1487

The information below is about J3_7A0S_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_47341.1

Basepair signature

cWW-tHH-F-tHW-tHS-tWW-cWW-cWW-F

Number of instances in this motif group

4

Unit IDs

7MSH|1|A|C|1437
7MSH|1|A|A|1438
7MSH|1|A|A|1439
7MSH|1|A|G|1440
*
7MSH|1|A|C|1840
7MSH|1|A|C|1841
7MSH|1|A|C|1842
7MSH|1|A|A|1843
7MSH|1|A|A|1844
7MSH|1|A|A|1845
7MSH|1|A|C|1846
*
7MSH|1|A|G|1855
7MSH|1|A|U|1856
7MSH|1|A|G|1857

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34