J3_7MSH_019

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CUAG*CGUAG*CAUUAAG

Length

16 nucleotides

Bulged bases

7MSH|1|a|U|864, 7MSH|1|a|A|866

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7MSH_019 not in the Motif Atlas

Homologous match to J3_5J7L_004

Geometric discrepancy: 0.1721

The information below is about J3_5J7L_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_85054.4

Basepair signature

cWW-tWW-tHS-F-cWW-tHS-cWW-F

Number of instances in this motif group

3

Unit IDs

7MSH|1|a|C|817
7MSH|1|a|U|818
7MSH|1|a|A|819
7MSH|1|a|G|820
*
7MSH|1|a|C|850
7MSH|1|a|G|851
7MSH|1|a|U|852
7MSH|1|a|A|853
7MSH|1|a|G|854
*
7MSH|1|a|C|861
7MSH|1|a|A|862
7MSH|1|a|U|863
7MSH|1|a|U|864
7MSH|1|a|A|865
7MSH|1|a|A|866
7MSH|1|a|G|867

Current chains

Chain a

16S rRNA

Nearby chains

Chain h

30S ribosomal protein S8