J3_7MSH_047

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

UCGGGAC*GACAA*UA

Length

14 nucleotides

Bulged bases

7MSH|1|A|A|1515

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7MSH_047 not in the Motif Atlas

Homologous match to J3_7A0S_018

Geometric discrepancy: 0.1682

The information below is about J3_7A0S_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_94309.2

Basepair signature

cWW-F-cWW-F-F-F-F-F-cWW-F

Number of instances in this motif group

10

Unit IDs

7MSH|1|A|U|1475
7MSH|1|A|C|1476
7MSH|1|A|G|1477
7MSH|1|A|G|1478
7MSH|1|A|G|1479
7MSH|1|A|A|1480
7MSH|1|A|C|1481
*
7MSH|1|A|G|1512
7MSH|1|A|A|1513
7MSH|1|A|C|1514
7MSH|1|A|A|1515
7MSH|1|A|A|1516
*
7MSH|1|A|U|1533
7MSH|1|A|A|1534

Current chains

Chain A

23S rRNA

Nearby chains

Chain T

50S ribosomal protein L23