J3_7MSM_014

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

CAUC*GUU*AUUAAAG

Length

14 nucleotides

Bulged bases

7MSM|1|A|A|2756

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7MSM_014 not in the Motif Atlas

Homologous match to J3_4WF9_009

Geometric discrepancy: 0.0965

The information below is about J3_4WF9_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32601.5

Basepair signature

cWW-tWH-cHW-F-cWW-tSS-F-cWW

Number of instances in this motif group

4

Unit IDs

7MSM|1|A|C|2755
7MSM|1|A|A|2756
7MSM|1|A|U|2757
7MSM|1|A|C|2758
*
7MSM|1|A|G|2783
7MSM|1|A|U|2784
7MSM|1|A|U|2785
*
7MSM|1|A|A|2799
7MSM|1|A|U|2800
7MSM|1|A|U|2801
7MSM|1|A|A|2802
7MSM|1|A|A|2803
7MSM|1|A|A|2804
7MSM|1|A|G|2805

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain K

50S ribosomal protein L14