J3_7MSZ_040
3D structure
- PDB id
- 7MSZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mtb 70SIC in complex with MtbEttA at Trans_R1 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUUGACAU*GCAG*CUUAUG
- Length
- 18 nucleotides
- Bulged bases
- 7MSZ|1|a|U|1206
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7MSZ_040 not in the Motif Atlas
- Homologous match to J3_4LFB_016
- Geometric discrepancy: 0.1759
- The information below is about J3_4LFB_016
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_28881.1
- Basepair signature
- cWW-tWH-F-F-cWW-cWW-F-F-F-cWS-cWW
- Number of instances in this motif group
- 2
Unit IDs
7MSZ|1|a|U|983
7MSZ|1|a|U|984
7MSZ|1|a|U|985
7MSZ|1|a|G|986
7MSZ|1|a|A|987
7MSZ|1|a|C|988
7MSZ|1|a|A|989
7MSZ|1|a|U|990
*
7MSZ|1|a|G|1035
7MSZ|1|a|C|1036
7MSZ|1|a|A|1037
7MSZ|1|a|G|1038
*
7MSZ|1|a|C|1202
7MSZ|1|a|U|1203
7MSZ|1|a|U|1204
7MSZ|1|a|A|1205
7MSZ|1|a|U|1206
7MSZ|1|a|G|1207
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain n
- 30S ribosomal protein S14 type Z
Coloring options: