J3_7MT2_020

3D structure

PDB id

7MT2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

CUAG*CGUAG*CAUUAAG

Length

16 nucleotides

Bulged bases

7MT2|1|a|U|864, 7MT2|1|a|A|866

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7MT2_020 not in the Motif Atlas

Homologous match to J3_5J7L_004

Geometric discrepancy: 0.1287

The information below is about J3_5J7L_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_85054.4

Basepair signature

cWW-tWW-tHS-F-cWW-tHS-cWW-F

Number of instances in this motif group

3

Unit IDs

7MT2|1|a|C|817
7MT2|1|a|U|818
7MT2|1|a|A|819
7MT2|1|a|G|820
*
7MT2|1|a|C|850
7MT2|1|a|G|851
7MT2|1|a|U|852
7MT2|1|a|A|853
7MT2|1|a|G|854
*
7MT2|1|a|C|861
7MT2|1|a|A|862
7MT2|1|a|U|863
7MT2|1|a|U|864
7MT2|1|a|A|865
7MT2|1|a|A|866
7MT2|1|a|G|867

Current chains

Chain a

16S rRNA

Nearby chains

Chain h

30S ribosomal protein S8