3D structure

PDB id
7MT3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mtb 70S with P/E tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
2.8 Å

Loop

Sequence
CGGA*UAC*GGAG
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7MT3_020 not in the Motif Atlas
Homologous match to J3_4LFB_003
Geometric discrepancy: 0.091
The information below is about J3_4LFB_003
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_52655.4
Basepair signature
cWW-tSH-cWW-F-cWW-cWW
Number of instances in this motif group
4

Unit IDs

7MT3|1|a|C|936
7MT3|1|a|G|937
7MT3|1|a|G|938
7MT3|1|a|A|939
*
7MT3|1|a|U|1227
7MT3|1|a|A|1228
7MT3|1|a|C|1229
*
7MT3|1|a|G|1329
7MT3|1|a|G|1330
7MT3|1|a|A|1331
7MT3|1|a|G|1332

Current chains

Chain a
16S rRNA

Nearby chains

Chain i
30S ribosomal protein S9
Chain m
30S ribosomal protein S13
Chain y
Transfer RNA; tRNA

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.5024 s