J3_7N1P_018

3D structure

PDB id

7N1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GGA*UUUAAAG*CAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7N1P_018 not in the Motif Atlas

Homologous match to J3_6PRV_001

Geometric discrepancy: 0.1268

The information below is about J3_6PRV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_28621.5

Basepair signature

cWW-tSS-cSS-tSH-cWW-cWW-tWW-F-F

Number of instances in this motif group

7

Unit IDs

7N1P|1|23|G|1055
7N1P|1|23|G|1056
7N1P|1|23|A|1057
*
7N1P|1|23|U|1081
7N1P|1|23|U|1082
7N1P|1|23|U|1083
7N1P|1|23|A|1084
7N1P|1|23|A|1085
7N1P|1|23|A|1086
7N1P|1|23|G|1087
*
7N1P|1|23|C|1102
7N1P|1|23|A|1103
7N1P|1|23|C|1104

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LJ

50S ribosomal protein L10

Chain LK

50S ribosomal protein L11

Chain Lj

50S ribosomal protein L36