3D structure

PDB id
7N1P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
2.33 Å

Loop

Sequence
CGG*CUUGA*UGACG
Length
13 nucleotides
Bulged bases
7N1P|1|16|U|653
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7N1P_029 not in the Motif Atlas
Homologous match to J3_5J7L_051
Geometric discrepancy: 0.0685
The information below is about J3_5J7L_051
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_17385.4
Basepair signature
cWW-F-cWW-cWW-tWH-tHS-cWW
Number of instances in this motif group
6

Unit IDs

7N1P|1|16|C|586
7N1P|1|16|G|587
7N1P|1|16|G|588
*
7N1P|1|16|C|651
7N1P|1|16|U|652
7N1P|1|16|U|653
7N1P|1|16|G|654
7N1P|1|16|A|655
*
7N1P|1|16|U|751
7N1P|1|16|G|752
7N1P|1|16|A|753
7N1P|1|16|C|754
7N1P|1|16|G|755

Current chains

Chain 16
16S rRNA

Nearby chains

Chain SH
30S ribosomal protein S8
Chain SL
30S ribosomal protein S12
Chain SO
30S ribosomal protein S15
Chain SQ
30S ribosomal protein S17

Coloring options:


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