J3_7N30_004

3D structure

PDB id

7N30 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

CUUG*CGGAG*CGUUAAG

Length

16 nucleotides

Bulged bases

7N30|1|16|U|871

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7N30_004 not in the Motif Atlas

Homologous match to J3_5J7L_004

Geometric discrepancy: 0.0552

The information below is about J3_5J7L_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_85054.4

Basepair signature

cWW-tWW-tHS-F-cWW-tHS-cWW-F

Number of instances in this motif group

3

Unit IDs

7N30|1|16|C|826
7N30|1|16|U|827
7N30|1|16|U|828
7N30|1|16|G|829
*
7N30|1|16|C|857
7N30|1|16|G|858
7N30|1|16|G|859
7N30|1|16|A|860
7N30|1|16|G|861
*
7N30|1|16|C|868
7N30|1|16|G|869
7N30|1|16|U|870
7N30|1|16|U|871
7N30|1|16|A|872
7N30|1|16|A|873
7N30|1|16|G|874

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SB

30S ribosomal protein S2

Chain SH

30S ribosomal protein S8

Chain SU

30S ribosomal protein S21