J3_7N31_013

3D structure

PDB id

7N31 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a post-translocation (POST) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

CAAUG*CGUAGUCC*GUCG

Length

17 nucleotides

Bulged bases

7N31|1|16|U|1240, 7N31|1|16|C|1302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7N31_013 not in the Motif Atlas

Homologous match to J3_4LFB_009

Geometric discrepancy: 0.1474

The information below is about J3_4LFB_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_03192.1

Basepair signature

cWW-cSS-tHW-F-F-F-cWW-cWW-cSH-cSH-F

Number of instances in this motif group

5

Unit IDs

7N31|1|16|C|1237
7N31|1|16|A|1238
7N31|1|16|A|1239
7N31|1|16|U|1240
7N31|1|16|G|1241
*
7N31|1|16|C|1296
7N31|1|16|G|1297
7N31|1|16|U|1298
7N31|1|16|A|1299
7N31|1|16|G|1300
7N31|1|16|U|1301
7N31|1|16|C|1302
7N31|1|16|C|1303
*
7N31|1|16|G|1334
7N31|1|16|U|1335
7N31|1|16|C|1336
7N31|1|16|G|1337

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SG

30S ribosomal protein S7

Chain SM

30S ribosomal protein S13