3D structure

PDB id
7N31 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Elongating 70S ribosome complex in a post-translocation (POST) conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
2.69 Å

Loop

Sequence
CAAUG*CGUAGUCC*GUCG
Length
17 nucleotides
Bulged bases
7N31|1|16|U|1240, 7N31|1|16|C|1302
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7N31_013 not in the Motif Atlas
Homologous match to J3_4LFB_009
Geometric discrepancy: 0.1474
The information below is about J3_4LFB_009
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_37047.6
Basepair signature
cWW-cSS-tHW-F-F-F-cWW-cWW-F-cSH-F-F
Number of instances in this motif group
4

Unit IDs

7N31|1|16|C|1237
7N31|1|16|A|1238
7N31|1|16|A|1239
7N31|1|16|U|1240
7N31|1|16|G|1241
*
7N31|1|16|C|1296
7N31|1|16|G|1297
7N31|1|16|U|1298
7N31|1|16|A|1299
7N31|1|16|G|1300
7N31|1|16|U|1301
7N31|1|16|C|1302
7N31|1|16|C|1303
*
7N31|1|16|G|1334
7N31|1|16|U|1335
7N31|1|16|C|1336
7N31|1|16|G|1337

Current chains

Chain 16
16S rRNA

Nearby chains

Chain SG
30S ribosomal protein S7
Chain SM
30S ribosomal protein S13

Coloring options:


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