J3_7NAW_011

3D structure

PDB id

7NAW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state B (Consensus Refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.05 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

7NAW|1|A|C|1214

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7NAW_011 not in the Motif Atlas

Homologous match to J3_6CZR_063

Geometric discrepancy: 0.2355

The information below is about J3_6CZR_063

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.1

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

3

Unit IDs

7NAW|1|A|C|990
7NAW|1|A|U|991
7NAW|1|A|U|992
7NAW|1|A|G|993
7NAW|1|A|A|994
7NAW|1|A|C|995
7NAW|1|A|A|996
7NAW|1|A|U|997
*
7NAW|1|A|A|1044
7NAW|1|A|C|1045
7NAW|1|A|A|1046
7NAW|1|A|G|1047
*
7NAW|1|A|C|1210
7NAW|1|A|U|1211
7NAW|1|A|U|1212
7NAW|1|A|A|1213
7NAW|1|A|C|1214
7NAW|1|A|G|1215

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

Small ribosomal subunit protein uS14