J3_7NFX_002
3D structure
- PDB id
- 7NFX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UC*GCCUAAGG*CG
- Length
- 12 nucleotides
- Bulged bases
- 7NFX|1|1|C|169, 7NFX|1|1|A|172
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7NFX_002 not in the Motif Atlas
- Homologous match to J3_1MFQ_002
- Geometric discrepancy: 0.5175
- The information below is about J3_1MFQ_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_77820.1
- Basepair signature
- cWW-cWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7NFX|1|1|U|128
7NFX|1|1|C|129
*
7NFX|1|1|G|168
7NFX|1|1|C|169
7NFX|1|1|C|170
7NFX|1|1|U|171
7NFX|1|1|A|172
7NFX|1|1|A|173
7NFX|1|1|G|174
7NFX|1|1|G|175
*
7NFX|1|1|C|221
7NFX|1|1|G|222
Current chains
- Chain 1
- SRP RNA 7SL
Nearby chains
- Chain u
- Signal recognition particle subunit SRP68
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