J3_7NHK_014
3D structure
- PDB id
- 7NHK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CC*GUAGAU*AAUCG
- Length
- 13 nucleotides
- Bulged bases
- 7NHK|1|A|A|2843, 7NHK|1|A|A|2845
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7NHK_014 not in the Motif Atlas
- Homologous match to J3_7A0S_013
- Geometric discrepancy: 0.1511
- The information below is about J3_7A0S_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76911.2
- Basepair signature
- cWW-tHS-F-F-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
7NHK|1|A|C|2824
7NHK|1|A|C|2825
*
7NHK|1|A|G|2841
7NHK|1|A|U|2842
7NHK|1|A|A|2843
7NHK|1|A|G|2844
7NHK|1|A|A|2845
7NHK|1|A|U|2846
*
7NHK|1|A|A|2892
7NHK|1|A|A|2893
7NHK|1|A|U|2894
7NHK|1|A|C|2895
7NHK|1|A|G|2896
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L32
- Chain H
- 50S ribosomal protein L3
- Chain Q
- 50S ribosomal protein L17
Coloring options: