J3_7NHK_019
3D structure
- PDB id
- 7NHK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUAA*UGCAG*CAUUAAG
- Length
- 16 nucleotides
- Bulged bases
- 7NHK|1|a|U|898
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7NHK_019 not in the Motif Atlas
- Homologous match to J3_5J7L_004
- Geometric discrepancy: 0.1478
- The information below is about J3_5J7L_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_85054.4
- Basepair signature
- cWW-tWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 3
Unit IDs
7NHK|1|a|C|852
7NHK|1|a|U|853
7NHK|1|a|A|854
7NHK|1|a|A|855
*
7NHK|1|a|U|884
7NHK|1|a|G|885
7NHK|1|a|C|886
7NHK|1|a|A|887
7NHK|1|a|G|888
*
7NHK|1|a|C|895
7NHK|1|a|A|896
7NHK|1|a|U|897
7NHK|1|a|U|898
7NHK|1|a|A|899
7NHK|1|a|A|900
7NHK|1|a|G|901
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain b
- RNA (5'-R(P*GP*GP*AP*GP*GP*UP*AP*UP*GP*AP*CP*AP*A)-3')
- Chain c
- 30S ribosomal protein S2
- Chain i
- 30S ribosomal protein S8
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