J3_7NSO_035

3D structure

PDB id

7NSO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

7NSO|1|a|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7NSO_035 not in the Motif Atlas

Homologous match to J3_4LFB_016

Geometric discrepancy: 0.1509

The information below is about J3_4LFB_016

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_28881.1

Basepair signature

cWW-tWH-F-F-cWW-cWW-F-F-F-cWS-cWW

Number of instances in this motif group

2

Unit IDs

7NSO|1|a|C|990
7NSO|1|a|U|991
7NSO|1|a|U|992
7NSO|1|a|G|993
7NSO|1|a|A|994
7NSO|1|a|C|995
7NSO|1|a|A|996
7NSO|1|a|U|997
*
7NSO|1|a|A|1044
7NSO|1|a|C|1045
7NSO|1|a|A|1046
7NSO|1|a|G|1047
*
7NSO|1|a|C|1210
7NSO|1|a|U|1211
7NSO|1|a|U|1212
7NSO|1|a|A|1213
7NSO|1|a|C|1214
7NSO|1|a|G|1215

Current chains

Chain a

16S rRNA (1540-MER)

Nearby chains

Chain n

30S ribosomal protein S14