J3_7NSQ_031

3D structure

PDB id

7NSQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGGACG*CC*GAAAAGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7NSQ_031 not in the Motif Atlas

Homologous match to J3_5J7L_069

Geometric discrepancy: 0.0706

The information below is about J3_5J7L_069

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_34864.2

Basepair signature

cWW-F-cWW-F-tHH-F-tHS-tHS-cWW

Number of instances in this motif group

4

Unit IDs

7NSQ|1|A|G|1424
7NSQ|1|A|G|1425
7NSQ|1|A|G|1426
7NSQ|1|A|A|1427
7NSQ|1|A|C|1428
7NSQ|1|A|G|1429
*
7NSQ|1|A|C|1564
7NSQ|1|A|C|1565
*
7NSQ|1|A|G|1568
7NSQ|1|A|A|1569
7NSQ|1|A|A|1570
7NSQ|1|A|A|1571
7NSQ|1|A|A|1572
7NSQ|1|A|G|1573
7NSQ|1|A|C|1574

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2