J3_7NSQ_035

3D structure

PDB id

7NSQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

7NSQ|1|a|U|1212, 7NSQ|1|a|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7NSQ_035 not in the Motif Atlas

Homologous match to J3_4LFB_016

Geometric discrepancy: 0.139

The information below is about J3_4LFB_016

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_28881.1

Basepair signature

cWW-tWH-F-F-cWW-cWW-F-F-F-cWS-cWW

Number of instances in this motif group

2

Unit IDs

7NSQ|1|a|C|990
7NSQ|1|a|U|991
7NSQ|1|a|U|992
7NSQ|1|a|G|993
7NSQ|1|a|A|994
7NSQ|1|a|C|995
7NSQ|1|a|A|996
7NSQ|1|a|U|997
*
7NSQ|1|a|A|1044
7NSQ|1|a|C|1045
7NSQ|1|a|A|1046
7NSQ|1|a|G|1047
*
7NSQ|1|a|C|1210
7NSQ|1|a|U|1211
7NSQ|1|a|U|1212
7NSQ|1|a|A|1213
7NSQ|1|a|C|1214
7NSQ|1|a|G|1215

Current chains

Chain a

16S rRNA

Nearby chains

Chain n

30S ribosomal protein S14