J3_7NWT_033
3D structure
- PDB id
- 7NWT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.66 Å
Loop
- Sequence
- GCCUAAC*GGGGAAUAU*AGC
- Length
- 19 nucleotides
- Bulged bases
- 7NWT|1|2|C|48, 7NWT|1|2|A|51
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7NWT_033 not in the Motif Atlas
- Homologous match to J3_5J7L_050
- Geometric discrepancy: 0.0606
- The information below is about J3_5J7L_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_46317.4
- Basepair signature
- cWW-cWW-cSW-F-cWW-F-F-F-F-cWW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7NWT|1|2|G|46
7NWT|1|2|C|47
7NWT|1|2|C|48
7NWT|1|2|U|49
7NWT|1|2|A|50
7NWT|1|2|A|51
7NWT|1|2|C|52
*
7NWT|1|2|G|359
7NWT|1|2|G|360
7NWT|1|2|G|361
7NWT|1|2|G|362
7NWT|1|2|A|363
7NWT|1|2|A|364
7NWT|1|2|U|365
7NWT|1|2|A|366
7NWT|1|2|U|367
*
7NWT|1|2|A|393
7NWT|1|2|G|394
7NWT|1|2|C|395
Current chains
- Chain 2
- 16S ribosomal RNA
Nearby chains
- Chain AA
- Protein 2A
- Chain BB
- Protein 2A
- Chain q
- 30S ribosomal protein S12
- Chain u
- 30S ribosomal protein S16
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