J3_7O19_013

3D structure

PDB id

7O19 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GC*GCGAAAAG*CC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7O19_013 not in the Motif Atlas

Homologous match to J3_5J7L_036

Geometric discrepancy: 0.0689

The information below is about J3_5J7L_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_60031.2

Basepair signature

cWW-cWW-cWW-tWH-tSH-F-F

Number of instances in this motif group

7

Unit IDs

7O19|1|BA|G|30
7O19|1|BA|C|31
*
7O19|1|BA|G|474
7O19|1|BA|C|475
7O19|1|BA|G|476
7O19|1|BA|A|477
7O19|1|BA|A|478
7O19|1|BA|A|479
7O19|1|BA|A|480
7O19|1|BA|G|481
*
7O19|1|BA|C|509
7O19|1|BA|C|510

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains

Chain BQ

50S ribosomal protein L20

Chain BU

50S ribosomal protein L24