J3_7O1A_018

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GGA*UUUAAAG*CAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7O1A_018 not in the Motif Atlas

Homologous match to J3_6PRV_001

Geometric discrepancy: 0.1433

The information below is about J3_6PRV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_28621.5

Basepair signature

cWW-tSS-cSS-tSH-cWW-cWW-tWW-F-F

Number of instances in this motif group

7

Unit IDs

7O1A|1|BA|G|1055
7O1A|1|BA|G|1056
7O1A|1|BA|A|1057
*
7O1A|1|BA|U|1081
7O1A|1|BA|U|1082
7O1A|1|BA|U|1083
7O1A|1|BA|A|1084
7O1A|1|BA|A|1085
7O1A|1|BA|A|1086
7O1A|1|BA|G|1087
*
7O1A|1|BA|C|1102
7O1A|1|BA|A|1103
7O1A|1|BA|C|1104

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains

Chain B4

50S ribosomal protein L36