3D structure

PDB id
7O1A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
CGGAAG*CAG*CAAG
Length
13 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7O1A_019 not in the Motif Atlas
Homologous match to J3_5J7L_041
Geometric discrepancy: 0.0664
The information below is about J3_5J7L_041
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_32852.6
Basepair signature
cWW-tSH-F-F-F-cWW-cWW-F
Number of instances in this motif group
5

Unit IDs

7O1A|1|BA|C|1298
7O1A|1|BA|G|1299
7O1A|1|BA|G|1300
7O1A|1|BA|A|1301
7O1A|1|BA|A|1302
7O1A|1|BA|G|1303
*
7O1A|1|BA|C|1625
7O1A|1|BA|A|1626
7O1A|1|BA|G|1627
*
7O1A|1|BA|C|1639
7O1A|1|BA|A|1640
7O1A|1|BA|A|1641
7O1A|1|BA|G|1642

Current chains

Chain BA
Ribosomal RNA 23S

Nearby chains

No other chains within 10Å

Coloring options:


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