J3_7OE1_018
3D structure
- PDB id
- 7OE1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 30S ribosomal subunit from E. coli
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.05 Å
Loop
- Sequence
- UAU*AGACUGC*GAGGAAGGUG
- Length
- 20 nucleotides
- Bulged bases
- 7OE1|1|A|U|1183
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7OE1_018 not in the Motif Atlas
- Homologous match to J3_4LFB_018
- Geometric discrepancy: 0.2729
- The information below is about J3_4LFB_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_40706.1
- Basepair signature
- cWW-F-cHW-cWW-tWH-cWW-F-tSW-tWS-cSH-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
7OE1|1|A|U|1116
7OE1|1|A|A|1117
7OE1|1|A|U|1118
*
7OE1|1|A|A|1155
7OE1|1|A|G|1156
7OE1|1|A|A|1157
7OE1|1|A|C|1158
7OE1|1|A|U|1159
7OE1|1|A|G|1160
7OE1|1|A|C|1161
*
7OE1|1|A|G|1175
7OE1|1|A|A|1176
7OE1|1|A|G|1177
7OE1|1|A|G|1178
7OE1|1|A|A|1179
7OE1|1|A|A|1180
7OE1|1|A|G|1181
7OE1|1|A|G|1182
7OE1|1|A|U|1183
7OE1|1|A|G|1184
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain B
- 30S ribosomal protein S2
- Chain I
- 30S ribosomal protein S9
- Chain N
- 30S ribosomal protein S14
Coloring options: