J3_7OG4_002

3D structure

PDB id

7OG4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with P/E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GAUUAC*GAUUAACCU*AGC

Length

18 nucleotides

Bulged bases

7OG4|1|AA|A|688, 7OG4|1|AA|A|691

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7OG4_002 not in the Motif Atlas

Homologous match to J3_5J7L_050

Geometric discrepancy: 0.5821

The information below is about J3_5J7L_050

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46317.4

Basepair signature

cWW-cWW-cSW-F-cWW-F-F-F-F-cWW-F-F-F-F

Number of instances in this motif group

4

Unit IDs

7OG4|1|AA|G|687
7OG4|1|AA|A|688
7OG4|1|AA|U|689
7OG4|1|AA|U|690
7OG4|1|AA|A|691
7OG4|1|AA|C|692
*
7OG4|1|AA|G|822
7OG4|1|AA|A|823
7OG4|1|AA|U|824
7OG4|1|AA|U|825
7OG4|1|AA|A|826
7OG4|1|AA|A|827
7OG4|1|AA|C|828
7OG4|1|AA|C|829
7OG4|1|AA|U|830
*
7OG4|1|AA|A|856
7OG4|1|AA|G|857
7OG4|1|AA|C|858

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AJ

28S ribosomal protein S12, mitochondrial

Chain AM

28S ribosomal protein S16, mitochondrial

Chain AT

28S ribosomal protein S25, mitochondrial