3D structure

PDB id
7OIG (explore in PDB, NAKB, or RNA 3D Hub)
Description
CspA-27 cotranslational folding intermediate 3
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CAAG*CCCAAAC*GUG
Length
14 nucleotides
Bulged bases
7OIG|1|1|A|1609
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7OIG_007 not in the Motif Atlas
Homologous match to J3_7A0S_007
Geometric discrepancy: 0.1343
The information below is about J3_7A0S_007
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_71677.1
Basepair signature
cWW-tSH-tWW-tHH-F-tHW-cWW-F-cWW
Number of instances in this motif group
2

Unit IDs

7OIG|1|1|C|1306
7OIG|1|1|A|1307
7OIG|1|1|A|1308
7OIG|1|1|G|1309
*
7OIG|1|1|C|1605
7OIG|1|1|C|1606
7OIG|1|1|C|1607
7OIG|1|1|A|1608
7OIG|1|1|A|1609
7OIG|1|1|A|1610
7OIG|1|1|C|1611
*
7OIG|1|1|G|1620
7OIG|1|1|U|1621
7OIG|1|1|G|1622

Current chains

Chain 1
23S rRNA

Nearby chains

Chain c
50S ribosomal protein L34

Coloring options:


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