J3_7OSA_004
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CUA*UUACG*CAAAG
- Length
- 13 nucleotides
- Bulged bases
- 7OSA|1|18S|A|1093
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7OSA_004 not in the Motif Atlas
- Homologous match to J3_8C3A_037
- Geometric discrepancy: 0.2579
- The information below is about J3_8C3A_037
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_95208.1
- Basepair signature
- cWW-tWW-tWW-F-cWW-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
7OSA|1|18S|C|1037
7OSA|1|18S|U|1038
7OSA|1|18S|A|1039
*
7OSA|1|18S|U|1079
7OSA|1|18S|U|1080
7OSA|1|18S|A|1081
7OSA|1|18S|C|1082
7OSA|1|18S|G|1083
*
7OSA|1|18S|C|1090
7OSA|1|18S|A|1091
7OSA|1|18S|A|1092
7OSA|1|18S|A|1093
7OSA|1|18S|G|1094
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain eS21
- 40S ribosomal protein S21
- Chain eS26
- 40S ribosomal protein S26
- Chain eS27
- 40S ribosomal protein S27-A
- Chain uS2
- 40S ribosomal protein S0
- Chain uS8
- 40S ribosomal protein S22-A
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