J3_7OSM_044
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AGAUGG*CGUUUCAAAGG*CACCAU
- Length
- 23 nucleotides
- Bulged bases
- 7OSM|1|25S|C|1556, 7OSM|1|25S|A|1558, 7OSM|1|25S|C|1581
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OSM|1|25S|A|1537
7OSM|1|25S|G|1538
7OSM|1|25S|A|1539
7OSM|1|25S|U|1540
7OSM|1|25S|G|1541
7OSM|1|25S|G|1542
*
7OSM|1|25S|C|1551
7OSM|1|25S|G|1552
7OSM|1|25S|U|1553
7OSM|1|25S|U|1554
7OSM|1|25S|U|1555
7OSM|1|25S|C|1556
7OSM|1|25S|A|1557
7OSM|1|25S|A|1558
7OSM|1|25S|A|1559
7OSM|1|25S|G|1560
7OSM|1|25S|G|1561
*
7OSM|1|25S|C|1579
7OSM|1|25S|A|1580
7OSM|1|25S|C|1581
7OSM|1|25S|C|1582
7OSM|1|25S|A|1583
7OSM|1|25S|U|1584
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain 58S
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain eL15
- 60S ribosomal protein L15-A
- Chain eL37
- Ribosomal protein L37
- Chain eL8
- 60S ribosomal protein L8-A
- Chain uL2
- 60S ribosomal protein L2-B
- Chain uL23
- 60S ribosomal protein L25
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