J3_7OW7_014
3D structure
- PDB id
- 7OW7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EIF6-bound large subunit of the human ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CUC*GAG*CAAAAG
- Length
- 12 nucleotides
- Bulged bases
- 7OW7|1|A|A|4280
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7OW7_014 not in the Motif Atlas
- Homologous match to J3_8C3A_010
- Geometric discrepancy: 0.1219
- The information below is about J3_8C3A_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_91491.5
- Basepair signature
- cWW-F-tWW-tHW-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
7OW7|1|A|C|4241
7OW7|1|A|U|4242
7OW7|1|A|C|4243
*
7OW7|1|A|G|4267
7OW7|1|A|A|4268
7OW7|1|A|G|4269
*
7OW7|1|A|C|4278
7OW7|1|A|A|4279
7OW7|1|A|A|4280
7OW7|1|A|A|4281
7OW7|1|A|A|4282
7OW7|1|A|G|4283
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain G
- 60S ribosomal protein L5
- Chain N
- 60S ribosomal protein L21
- Chain q
- 60S ribosomal protein L11
Coloring options: