J3_7P7Q_018
3D structure
- PDB id
- 7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CUAA*UGCAG*CAUUAAG
- Length
- 16 nucleotides
- Bulged bases
- 7P7Q|1|a|U|898, 7P7Q|1|a|A|900
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7P7Q_018 not in the Motif Atlas
- Homologous match to J3_5J7L_004
- Geometric discrepancy: 0.1099
- The information below is about J3_5J7L_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_85054.4
- Basepair signature
- cWW-tWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 3
Unit IDs
7P7Q|1|a|C|852
7P7Q|1|a|U|853
7P7Q|1|a|A|854
7P7Q|1|a|A|855
*
7P7Q|1|a|U|884
7P7Q|1|a|G|885
7P7Q|1|a|C|886
7P7Q|1|a|A|887
7P7Q|1|a|G|888
*
7P7Q|1|a|C|895
7P7Q|1|a|A|896
7P7Q|1|a|U|897
7P7Q|1|a|U|898
7P7Q|1|a|A|899
7P7Q|1|a|A|900
7P7Q|1|a|G|901
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain b
- mRNA
- Chain c
- 30S ribosomal protein S2
- Chain i
- 30S ribosomal protein S8
Coloring options: