J3_7P7Q_020
3D structure
- PDB id
- 7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- UGGA*UAC*GGAA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7P7Q_020 not in the Motif Atlas
- Homologous match to J3_4LFB_003
- Geometric discrepancy: 0.0675
- The information below is about J3_4LFB_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_44359.2
- Basepair signature
- cWW-tSH-cWW-F-cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
7P7Q|1|a|U|970
7P7Q|1|a|G|971
7P7Q|1|a|G|972
7P7Q|1|a|A|973
*
7P7Q|1|a|U|1261
7P7Q|1|a|A|1262
7P7Q|1|a|C|1263
*
7P7Q|1|a|G|1363
7P7Q|1|a|G|1364
7P7Q|1|a|A|1365
7P7Q|1|a|A|1366
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain D
- Transfer RNA; tRNA
- Chain j
- 30S ribosomal protein S9
- Chain n
- 30S ribosomal protein S13
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