J3_7P7R_007

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGUAUG*CGA*UAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7P7R_007 not in the Motif Atlas

Homologous match to J3_7RQB_007

Geometric discrepancy: 0.097

The information below is about J3_7RQB_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.3

Basepair signature

cWW-tSH-tHW-F-F-cWW-cWW-F

Number of instances in this motif group

4

Unit IDs

7P7R|1|A|C|1333
7P7R|1|A|G|1334
7P7R|1|A|U|1335
7P7R|1|A|A|1336
7P7R|1|A|U|1337
7P7R|1|A|G|1338
*
7P7R|1|A|C|1667
7P7R|1|A|G|1668
7P7R|1|A|A|1669
*
7P7R|1|A|U|1681
7P7R|1|A|A|1682
7P7R|1|A|A|1683
7P7R|1|A|G|1684

Current chains

Chain A

23S rRNA

Nearby chains