J3_7P7R_008

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUAAG*CGUAAAC*GUAG

Length

16 nucleotides

Bulged bases

7P7R|1|A|U|1649, 7P7R|1|A|A|1651

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7P7R_008 not in the Motif Atlas

Homologous match to J3_4WF9_005

Geometric discrepancy: 0.1365

The information below is about J3_4WF9_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_68164.1

Basepair signature

cWW-tSH-F-F-tHW-F-F-cWW-cWW-F

Number of instances in this motif group

1

Unit IDs

7P7R|1|A|C|1340
7P7R|1|A|U|1341
7P7R|1|A|A|1342
7P7R|1|A|A|1343
7P7R|1|A|G|1344
*
7P7R|1|A|C|1647
7P7R|1|A|G|1648
7P7R|1|A|U|1649
7P7R|1|A|A|1650
7P7R|1|A|A|1651
7P7R|1|A|A|1652
7P7R|1|A|C|1653
*
7P7R|1|A|G|1662
7P7R|1|A|U|1663
7P7R|1|A|A|1664
7P7R|1|A|G|1665

Current chains

Chain A

23S rRNA

Nearby chains

Chain 6

50S ribosomal protein L34