J3_7P7R_012

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAUC*GUU*AUUAAAG

Length

14 nucleotides

Bulged bases

7P7R|1|A|A|2531, 7P7R|1|A|U|2532

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7P7R_012 not in the Motif Atlas

Homologous match to J3_4WF9_009

Geometric discrepancy: 0.0878

The information below is about J3_4WF9_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32601.6

Basepair signature

cWW-cWH-cWW-tWH-tSS-F-cWW-F

Number of instances in this motif group

4

Unit IDs

7P7R|1|A|C|2530
7P7R|1|A|A|2531
7P7R|1|A|U|2532
7P7R|1|A|C|2533
*
7P7R|1|A|G|2558
7P7R|1|A|U|2559
7P7R|1|A|U|2560
*
7P7R|1|A|A|2574
7P7R|1|A|U|2575
7P7R|1|A|U|2576
7P7R|1|A|A|2577
7P7R|1|A|A|2578
7P7R|1|A|A|2579
7P7R|1|A|G|2580

Current chains

Chain A

23S rRNA

Nearby chains

Chain N

50S ribosomal protein L14