J3_7P7R_013

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAU*AGUAAG*CGAGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7P7R_013 not in the Motif Atlas

Homologous match to J3_7A0S_012

Geometric discrepancy: 0.1947

The information below is about J3_7A0S_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_20574.1

Basepair signature

cWW-F-F-tWH-cWW-tSS-F-tHS-F-cWW

Number of instances in this motif group

1

Unit IDs

7P7R|1|A|C|2802
7P7R|1|A|A|2803
7P7R|1|A|U|2804
*
7P7R|1|A|A|2816
7P7R|1|A|G|2817
7P7R|1|A|U|2818
7P7R|1|A|A|2819
7P7R|1|A|A|2820
7P7R|1|A|G|2821
*
7P7R|1|A|C|2899
7P7R|1|A|G|2900
7P7R|1|A|A|2901
7P7R|1|A|G|2902
7P7R|1|A|G|2903

Current chains

Chain A

23S rRNA

Nearby chains

Chain H

50S ribosomal protein L3