J3_7P7U_030
3D structure
- PDB id
- 7P7U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome with P-tRNA, state IV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUUG*CGAUAGUGAACCAGUAC*GGAAAG
- Length
- 27 nucleotides
- Bulged bases
- 7P7U|1|A|U|34, 7P7U|1|A|U|487, 7P7U|1|A|C|495
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7P7U_030 not in the Motif Atlas
- Homologous match to J3_9DFE_003
- Geometric discrepancy: 0.0892
- The information below is about J3_9DFE_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_07616.2
- Basepair signature
- cWW-cSS-tSS-tSW-tHW-cWW-tWH-F-F-tHH-tSS-tWH-F-tHS-cWW-F-cSH
- Number of instances in this motif group
- 11
Unit IDs
7P7U|1|A|C|32
7P7U|1|A|U|33
7P7U|1|A|U|34
7P7U|1|A|G|35
*
7P7U|1|A|C|484
7P7U|1|A|G|485
7P7U|1|A|A|486
7P7U|1|A|U|487
7P7U|1|A|A|488
7P7U|1|A|G|489
7P7U|1|A|U|490
7P7U|1|A|G|491
7P7U|1|A|A|492
7P7U|1|A|A|493
7P7U|1|A|C|494
7P7U|1|A|C|495
7P7U|1|A|A|496
7P7U|1|A|G|497
7P7U|1|A|U|498
7P7U|1|A|A|499
7P7U|1|A|C|500
*
7P7U|1|A|G|507
7P7U|1|A|G|508
7P7U|1|A|A|509
7P7U|1|A|A|510
7P7U|1|A|A|511
7P7U|1|A|G|512
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 6
- 50S ribosomal protein L34
- Chain I
- 50S ribosomal protein L4
- Chain T
- 50S ribosomal protein L20
- Chain W
- 50S ribosomal protein L23
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