J3_7PIB_005
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GGA*UUUAAAG*CAC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7PIB_005 not in the Motif Atlas
- Homologous match to J3_8VTW_003
- Geometric discrepancy: 0.368
- The information below is about J3_8VTW_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7PIB|1|3|G|1090
7PIB|1|3|G|1091
7PIB|1|3|A|1092
*
7PIB|1|3|U|1116
7PIB|1|3|U|1117
7PIB|1|3|U|1118
7PIB|1|3|A|1119
7PIB|1|3|A|1120
7PIB|1|3|A|1121
7PIB|1|3|G|1122
*
7PIB|1|3|C|1137
7PIB|1|3|A|1138
7PIB|1|3|C|1139
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L36
- Chain g
- 50S ribosomal protein L10
- Chain h
- 50S ribosomal protein L11
Coloring options: