J3_7PIB_007
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CUAAG*CGAGAAC*GUAG
- Length
- 16 nucleotides
- Bulged bases
- 7PIB|1|3|A|1643
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7PIB_007 not in the Motif Atlas
- Homologous match to J3_4WF9_005
- Geometric discrepancy: 0.2813
- The information below is about J3_4WF9_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_68164.1
- Basepair signature
- cWW-tSH-F-F-tHW-F-F-cWW-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
7PIB|1|3|C|1333
7PIB|1|3|U|1334
7PIB|1|3|A|1335
7PIB|1|3|A|1336
7PIB|1|3|G|1337
*
7PIB|1|3|C|1639
7PIB|1|3|G|1640
7PIB|1|3|A|1641
7PIB|1|3|G|1642
7PIB|1|3|A|1643
7PIB|1|3|A|1644
7PIB|1|3|C|1645
*
7PIB|1|3|G|1654
7PIB|1|3|U|1655
7PIB|1|3|A|1656
7PIB|1|3|G|1657
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L34
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