J3_7PIB_010
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UUC*GAG*UGUAAG
- Length
- 12 nucleotides
- Bulged bases
- 7PIB|1|3|G|2341, 7PIB|1|3|A|2344
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7PIB_010 not in the Motif Atlas
- Homologous match to J3_8VTW_007
- Geometric discrepancy: 0.5315
- The information below is about J3_8VTW_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_91491.5
- Basepair signature
- cWW-F-tWW-tHW-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
7PIB|1|3|U|2303
7PIB|1|3|U|2304
7PIB|1|3|C|2305
*
7PIB|1|3|G|2329
7PIB|1|3|A|2330
7PIB|1|3|G|2331
*
7PIB|1|3|U|2340
7PIB|1|3|G|2341
7PIB|1|3|U|2342
7PIB|1|3|A|2343
7PIB|1|3|A|2344
7PIB|1|3|G|2345
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 5S ribosomal RNA; 5S rRNA
- Chain d
- 50S ribosomal protein L5
- Chain n
- 50S ribosomal protein L18
- Chain u
- 50S ribosomal protein L27
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