J3_7PIB_026
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UGAGCUA*UAG*CGAA
- Length
- 14 nucleotides
- Bulged bases
- 7PIB|1|3|G|721, 7PIB|1|3|G|827, 7PIB|1|3|A|828
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7PIB_026 not in the Motif Atlas
- Homologous match to J3_7A0S_004
- Geometric discrepancy: 0.2276
- The information below is about J3_7A0S_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_46658.2
- Basepair signature
- cWW-tWH-cWW-tSW-F-F-cWW
- Number of instances in this motif group
- 11
Unit IDs
7PIB|1|3|U|718
7PIB|1|3|G|719
7PIB|1|3|A|720
7PIB|1|3|G|721
7PIB|1|3|C|722
7PIB|1|3|U|723
7PIB|1|3|A|724
*
7PIB|1|3|U|808
7PIB|1|3|A|809
7PIB|1|3|G|810
*
7PIB|1|3|C|826
7PIB|1|3|G|827
7PIB|1|3|A|828
7PIB|1|3|A|829
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L34
- Chain a
- 50S ribosomal protein L2
Coloring options: