J3_7PIB_041
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UG*UGUU*GCAA
- Length
- 10 nucleotides
- Bulged bases
- 7PIB|1|5|A|1092
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7PIB_041 not in the Motif Atlas
- Homologous match to J3_4LFB_017
- Geometric discrepancy: 0.2718
- The information below is about J3_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_11018.1
- Basepair signature
- cWW-cWW-tSS-F-F-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
7PIB|1|5|U|1064
7PIB|1|5|G|1065
*
7PIB|1|5|U|1074
7PIB|1|5|G|1075
7PIB|1|5|U|1076
7PIB|1|5|U|1077
*
7PIB|1|5|G|1090
7PIB|1|5|C|1091
7PIB|1|5|A|1092
7PIB|1|5|A|1093
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain A
- 30S ribosomal protein S2
- Chain D
- 30S ribosomal protein S5
Coloring options: