J3_7PZY_005
3D structure
- PDB id
- 7PZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant Candida albicans 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.32 Å
Loop
- Sequence
- UGAACUA*UAG*CGAA
- Length
- 14 nucleotides
- Bulged bases
- 7PZY|1|1|A|813, 7PZY|1|1|G|920
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7PZY_005 not in the Motif Atlas
- Homologous match to J3_8C3A_003
- Geometric discrepancy: 0.0415
- The information below is about J3_8C3A_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_39238.5
- Basepair signature
- cWW-tWH-cWW-tSW-F-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
7PZY|1|1|U|810
7PZY|1|1|G|811
7PZY|1|1|A|812
7PZY|1|1|A|813
7PZY|1|1|C|814
7PZY|1|1|U|815
7PZY|1|1|A|816
*
7PZY|1|1|U|901
7PZY|1|1|A|902
7PZY|1|1|G|903
*
7PZY|1|1|C|919
7PZY|1|1|G|920
7PZY|1|1|A|921
7PZY|1|1|A|922
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain AK
- Ribosomal protein L37
- Chain j
- Ribosomal 60S subunit protein L2A
- Chain v
- Ribosomal protein L15
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