J3_7PZY_010
3D structure
- PDB id
- 7PZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant Candida albicans 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.32 Å
Loop
- Sequence
- GAAA*UCAUAAC*GUC
- Length
- 14 nucleotides
- Bulged bases
- 7PZY|1|1|U|1836, 7PZY|1|1|A|1837
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7PZY_010 not in the Motif Atlas
- Homologous match to J3_8C3A_007
- Geometric discrepancy: 0.0569
- The information below is about J3_8C3A_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_74051.1
- Basepair signature
- cWW-tSH-tWW-tHW-F-F-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
7PZY|1|1|G|1484
7PZY|1|1|A|1485
7PZY|1|1|A|1486
7PZY|1|1|A|1487
*
7PZY|1|1|U|1833
7PZY|1|1|C|1834
7PZY|1|1|A|1835
7PZY|1|1|U|1836
7PZY|1|1|A|1837
7PZY|1|1|A|1838
7PZY|1|1|C|1839
*
7PZY|1|1|G|1848
7PZY|1|1|U|1849
7PZY|1|1|C|1850
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AH
- Ribosomal 60S subunit protein L34B
- Chain AK
- Ribosomal protein L37
- Chain AM
- 60S ribosomal protein L39
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