J3_7Q08_034
3D structure
- PDB id
- 7Q08 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cycloheximide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- CUAUG*CGUCACAGAG*CGUGCG
- Length
- 21 nucleotides
- Bulged bases
- 7Q08|1|1|C|209
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7Q08_034 not in the Motif Atlas
- Homologous match to J3_8C3A_046
- Geometric discrepancy: 0.0822
- The information below is about J3_8C3A_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_24131.1
- Basepair signature
- cWW-F-cSS-cHH-cWW-cWW-F-cWW-cSW-tHS-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
7Q08|1|1|C|184
7Q08|1|1|U|185
7Q08|1|1|A|186
7Q08|1|1|U|187
7Q08|1|1|G|188
*
7Q08|1|1|C|204
7Q08|1|1|G|205
7Q08|1|1|U|206
7Q08|1|1|C|207
7Q08|1|1|A|208
7Q08|1|1|C|209
7Q08|1|1|A|210
7Q08|1|1|G|211
7Q08|1|1|A|212
7Q08|1|1|G|213
*
7Q08|1|1|C|225
7Q08|1|1|G|226
7Q08|1|1|U|227
7Q08|1|1|G|228
7Q08|1|1|C|229
7Q08|1|1|G|230
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain 9
- Ribosomal 60S subunit protein L26B
- Chain l
- Ribosomal 60S subunit protein L4B
Coloring options: