J3_7Q08_038
3D structure
- PDB id
- 7Q08 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cycloheximide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- AGACG*UC*GAAAAU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7Q08_038 not in the Motif Atlas
- Homologous match to J3_8P9A_058
- Geometric discrepancy: 0.0825
- The information below is about J3_8P9A_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_12393.2
- Basepair signature
- cWW-tSH-tHH-F-F-cWW-F-cWW
- Number of instances in this motif group
- 3
Unit IDs
7Q08|1|1|A|1650
7Q08|1|1|G|1651
7Q08|1|1|A|1652
7Q08|1|1|C|1653
7Q08|1|1|G|1654
*
7Q08|1|1|U|1787
7Q08|1|1|C|1788
*
7Q08|1|1|G|1792
7Q08|1|1|A|1793
7Q08|1|1|A|1794
7Q08|1|1|A|1795
7Q08|1|1|A|1796
7Q08|1|1|U|1797
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain AH
- Ribosomal 60S subunit protein L34B
- Chain AQ
- Ribosomal 60S subunit protein L43A
- Chain j
- Ribosomal 60S subunit protein L2A
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