J3_7Q0F_017
3D structure
- PDB id
- 7Q0F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with phyllanthoside
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.64 Å
Loop
- Sequence
- UAUC*GUU*ACUAAUA
- Length
- 14 nucleotides
- Bulged bases
- 7Q0F|1|1|A|2859, 7Q0F|1|1|U|2860
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7Q0F_017 not in the Motif Atlas
- Homologous match to J3_8C3A_011
- Geometric discrepancy: 0.0512
- The information below is about J3_8C3A_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_98597.1
- Basepair signature
- cWW-tWW-cHW-tSH-cWW-tSS-F-cSS-cWW
- Number of instances in this motif group
- 2
Unit IDs
7Q0F|1|1|U|2858
7Q0F|1|1|A|2859
7Q0F|1|1|U|2860
7Q0F|1|1|C|2861
*
7Q0F|1|1|G|2886
7Q0F|1|1|U|2887
7Q0F|1|1|U|2888
*
7Q0F|1|1|A|2902
7Q0F|1|1|C|2903
7Q0F|1|1|U|2904
7Q0F|1|1|A|2905
7Q0F|1|1|A|2906
7Q0F|1|1|U|2907
7Q0F|1|1|A|2908
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 6
- Ribosomal 60S subunit protein L23B
- Chain k
- Ribosomal 60S subunit protein L3
- Chain w
- Ribosomal 60S subunit protein L16A
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